Features exported to CDX

Atom properties

The atom properties are exported to CDX file format the following way:

ChemAxon

ChemBioDraw

Comment

Atomic charge

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's<n>' query property except 's*'

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Substituents Exactly

's*' query property

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Free Sites '*0'

'u' query property

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Unsaturation

Reaction Stereo

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Enhanced Stereochemistry

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Radical

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

'h<n>' query property except 'h<0>'

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Free Sites set to implicit hydrogens on the atom minus n.

'h<0>' query property

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Implicit Hydrogens not allowed.

'rb<n>' query property

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Ring Bond Count

'H', 'X', 'R', 'r' query properties and Query Valence

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Written and read as user definied properties. ChemBioDraw removes them.

Bonds

The following bond features exported to CDX file format from Marvin:

ChemAxon

ChemBioDraw

Comment

Single bond

Single bond

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Plain

Single bond Down

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Hashed Wedged

Bold

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Bold bond

Single bond Up

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Hollow Wedged

Coordinative bond

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Dative

Single bond Up or Down

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Wavy

Double bonds

Double bond

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Plain

Single or double query bond type

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Tautomeric

Aromatic

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Aromatic bond

Triple bond

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Triple bond

Bond properties

Query bonds

Any

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Any bond

S/D

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Single or double query bond type

S/A

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Single or aromatic query bond type

D/A

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Double or aromatic query bond type

Topology

Ring

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Bond is in ring

Chain

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Bond is in chain

Reaction center

Center

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The bond is a reacting center.

Make/Break

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The bond is made or broken in the reaction

Change

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The bond (order) has changed in the reaction

Make and Change

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The bond is created and changed

Not Center

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The bond is not a reacting center

Not modified

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The bond is not modified in the reaction

Reaction arrow

The following reaction arrows exported to CDX file format from Marvin:

ChemAxon

ChemBioDraw

Comment

Single reaction arrow type

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Solid

Double reaction arrow type

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Retrosynthetic

Resonance arrow type

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Resonance

Equilibrium arrow type

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Equilibrium

Groups

ChemAxon

ChemBioDraw

Comment

Any polymer S-group type

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Anypolymer (anyp)

Component S-group type

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Component (c)

Copolymer S-group type

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Copolymer (co)

Copolymer S-group type with alternating polymer S-group subtype

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Copolymer, alternating (alt)

Copolymer S-group type with block polymer S-group subtype

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Copolymer, block (blk)

Copolymer S-group type with random polymer S-group subtype

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Copolymer, random (ran)

Crosslink S-group type

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Crosslink (xl)

Generic S-group type

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Generic ()

Graft S-group type

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Graft (grf)

Mer S-group type

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Mer (mer)

Formulation S-group type.

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Mixture, ordered (f)

Mixture S-group type

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Mixture, unordered (mix)

Modification S-group type

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Modification (mod)

Monomer S-group type

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Monomer (mon)

Multiple group S-group type

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Multiple Group (#)

SRU S-group type

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SRU (n)

Repeat pattern

Head-to-tail S-group connectivity

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Head-to-Tail

Head-to-head S-group connectivity

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Head-to-Head

Either unknown S-group connectivity

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Either/Unknown

Flip Type

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Supported

Symbols

ChemAxon

ChemBioDraw

Comment

LP atoms

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Exported as graphical Lone Pairs

Absolute stereo

images/s/en_US/8100/6512c1e2a41cdf14570641b46bd2fe3eaeb38d03/_/images/icons/emoticons/check.svg

Exported as 'Abs' label