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  • Checker searches for bond lengths different than the default setting.
  • Fixer :
    offers cleaning the structure by:
    • 2D clean or (clean);
    • partial clean (partialclean).

Example :

Bond Length Checker (bondlength)Warning:Fix
Clean (clean)
Detect short bondsex_bondlength_chex_bondlength_f
Detect long bondsex_bondlength_chex_bondlength_f
Detect both bondsex_bondlength_chex_bondlength_f


The current version of bond length checker examines chain bonds of 2D molecules. Partial clean is not available.

Bond length checker does not check the length of coordinate bonds and position variation bonds.