Biomolecule Toolkit History of Changes

October 11st, 2018: Biomolecule Toolkit 18.24.0

Improvements

• New Rest endpoint for health check: /health
• Data migration from older versions handled automatically

API changes

See the detailed description in apichanges_18_24_0.html

July 31st, 2018: Biomolecule Toolkit 18.16.0

Improvements

• “No structure” registration.
  • New options for entity types to control the rules of structureless macromolecules. The entity type has MUST_CONTAIN, CAN_CONTAIN and MUST_NOT_CONTAIN options.
  • Structureless rules validation on entity registration.
• Lot registration.
  • Lot level registration without structure but with lot level attributes.
  • Attribute data validation on lot level.
  • LOT ID generation based on parent ID. (CID)
  • New page for Lot registration in the Biomolecule registration client.
• Flexible ID generation for entity types.
  • Default settings for generating corporate ID for macromolecules
  • Admin service to create new ID generating rules by entity types.
• Data type validation for attributes.
• More flexible additional data definition on macromolecule and component level.
• Registering biomolecules with domains.

Bugfixes

• Response code of get macromolecules by helm service (/rest/macromolecules/helm) was incorrect when the result set was empty.
• Macromolecule annotations were not appeared in the output HELM string.
• Retrieving macromolecules was slow for 100 monomers components.

July 17th, 2018: Biomolecule Toolkit 18.4.0

Improvements

HELM2 format has become the primary format in Biomolecule Toolkit.

Bugfixes

• Cyclic HELM conversion to sequence format failed.
• Search with entity type filter in biotoolkit demo page caused error.
• Syncronization problem was present in aromatic MonomerCount service.

February 8th, 2018: Biomolecule Toolkit 18.3.0

Improvements

• Two new endpoints for macromolecule property calculation:
  • Pairwise SequenceAlignment calculation
  • Aromatic MonomerCount calculation
• IsoelectricPoint web service input type has changed, it has fored to text/plain.
• HELM2 formatted macromolecule registration is available.

Bugfixes

Macromolecule resolvation with bridge connections failed previously.

January 5th, 2018: Biomolecule Toolkit 17.29.0

Improvements

• New default monomer library.
• Oracle property template file has been changed.
• Isoelectric point calculation API.
• Prepare macromolecule domain handling on database level

Bugfixes

• There were Oracle specific issues.

November 16th, 2017: Biomolecule Toolkit 17.28.0

Fixes security issues for bioreg web client.

November 2nd, 2017: Biomolecule Toolkit 17.22.1

Fixes for build package.

October 18th, 2017: Biomolecule Toolkit 17.22.0

First release of Biomolecule Toolkit.