Query Atoms


    Default query atom setting. It is also combo button : the other types of atoms can be selected from a sub-menu, after clicking on the black triangle of the lower-right corner of the button.

    What kind of query atoms are available in Marvin JS?

    Query atom symbol Included Atoms
    images/download/attachments/5310981/image2015-2-6_17_41_35.png Any of the elements except hydrogen
    images/download/attachments/5310981/image2015-2-6_17_46_4.png Hetero atom (any atom except carbon and hydrogen)
    images/download/attachments/5310981/image2015-2-6_17_45_48.png Metal atom
    images/download/attachments/5310981/image2015-2-6_17_45_40.png Halogen atom
    images/download/attachments/5310981/image2015-2-6_17_45_26.png Any of the elements including hydrogen
    images/download/attachments/5310981/image2015-2-6_17_45_12.png Any of the elements except carbon
    images/download/attachments/5310981/image2015-2-6_17_44_50.png Metal atom or hydrogen
    images/download/attachments/5310981/image2015-2-6_17_44_26.png Halogen atom or hydrogen
    images/download/attachments/5310981/image2015-2-6_17_44_6.png Pseudo atom
    images/download/attachments/5310981/image2016-11-7_15_16_10.png Quick access to Atom query properties dialog dialog.

    images/download/attachments/5310981/image2015-3-18_10_6_29.pngHow to draw a query atom:

    Choose the appropriate query atom type from the combo-box.

    The selected atom appears on the tip of the mouse pointer.

    You can put it onto the canvas as many times as it is needed.

    To draw a Pseudo atom you should open the Pseudo atom dialog. For more information please, check the Pseudo atom dialog section.

    Related pages

    Atom properties dialog in Marvin JS

    Pseudo atom dialog

    Atom query properties dialog

    Atom drawing

    Query Structures in Marvin JS

    ...back to Atom toolbar