Down Wedge Orientation allows changing the wedge bond display convention. Down wedge points downward in MDL's convention, upward (at the chiral center) in Daylight's.
"Any" Bond Line Style offers three different modes to display bonds of unknown types: Automatic, Dashed and Solid. This option can be separately set to be used in MarvinSketch and MarvinView.
Terminal Bond Deletion Method offers 2 ways to delete the terminal bond of a molecule: only the bond is deleted or the terminal atom disappears with the bond.