MarvinSketch Structure Display Parameters

    Concepts

    The description and usage of R-group structures in Marvin can be found in the R-groups and How to Draw R-group queries paragraph of the Marvin User's Guide.

    How to work with structure display parameters to hide R-group definitions

    By default, MarvinSketch displays all the R-group definitions that belong to a scaffold.

    Sometimes it is very practical to hide the R-group definitions because they take up too much place from the display and we would like to emphasize the scaffold.

    The result of switching off the R-group definitions can be seen on the picture below:

    images/download/attachments/5317163/rgroups.png

    The code below is taken from SketchParams.java, where the R-group definitions are hidden using the setParams method of the MSketchPane class.

     msketchPane. setParams (ParameterConstants.R_GROUPS_VISIBLE+ "=false" );