Bond Pop-up Menu

    The bond pop-up menu appears when you right-click on a bond within the molecule. It allows you to make changes to the selected bond. It contains options for bond-specific activities that also can be accessed from the Bond Menu.

    Menu item Description
    Type Changes the selected bond type to Single. Changes the type of the selected bond. For more information regarding bonds, see Draw Bonds.
    Bold Thickens the selected bond.
    Hashed Changes the selected bond hashed.
    Topology > None Removes defined bond topologies.
    Topology > In Ring The specified bond must be in a ring to score a hit.
    Topology > In Chain The specified bond must be in a chain to score a hit.
    Reacting Center > None Removes added bond property.
    Reacting Center > Center Specifies that the bond takes part in the reaction.
    Reacting Center > Make or Break The assigned bond can form or disappear in the reaction.
    Reacting Center > Change The assigned bond remains and can alter during the reaction.
    Reacting Center > Make and Change The assigned bond can form, break, or change its type during the reaction.
    Reacting Center > Not Center The assigned bond can not be the reaction center.
    Stereo Search Uses stereo configuration of the specified double bond when the molecule is used as a query.
    Arrange > Bring to Front Brings the selected bond in front of the others.
    Arrange > Send to Back Sends the selected bond to the back of the others.
    Align > Horizontally Orients the selected bond horizontally.
    Align > Vertically Orients the bond vertically.
    Group Creates a custom Substructure Group (S-group)
    Add > Explicit Hydrogens Adds explicit H atoms.
    Add > Map Atoms Maps atoms.
    Add > Data Attaches data
    Add > Multi-Center Adds a multi-center attachment point representing a group of atoms.
    Add> Position Variation Bond Create a variable point of attachment to represent a connection point to a group of atoms.
    Remove > Explicit Hydrogens Removes explicit H atoms.
    Remove > Unmap Atoms Unmaps atoms.
    Transformation > Drag selection Enables you to drag the selected bond.
    Transformation > Rotate in 3D Options for rotation
    Format Formats color, thickness, and length of the selected bond.
    Add to My templates Adds the bond to the Advanced Template Toolbar
    Edit properties Adds bond properties.