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Replace Atoms

This action replaces chemical element with other chemical element.

  • Allow valence error on replace : Atom exchange occurs even if it causes valence error on the relevant atom.

Example :

Action Input Output
Replace Atom N to O (replaceatoms:queryatom=N:replaceatom=O) images/download/attachments/1803716/replaceatoms_in.png Replace atoms input images/download/attachments/1803716/replaceatoms_out.png Replace atoms output
Replace Atom N to O (replaceatoms:queryatom=N:replaceatom=O:allowValenceError=true) images/download/attachments/1803716/replaceatoms_in.png Replace atoms input images/download/attachments/1803716/replaceatoms2_out.png Replace atoms output 2

Note : Action replaces atoms inside abbreviated groups; the affected group will be ungrouped.