Integration¶

Downstream
Identifiers
Links

Downstream¶


The Downstream configuration

By enabling the downstream publishing the JMS publishing in case of changes is controlled.

The image format for the fused structure in the published message can be set (mol:V3 format is the default setting).

The Downstream publishing cron job interval is not available since version 20.8.0.

Since version 21.9.0 the order of the additional data records have been included in the downstream messages as element.

List fields:

1 2	`- <order>0</order> means first list item - <order>1</order> means second list item.`

Collections:

1 2	`- <order>0</order> means values in the first row - <order>1</order> means values in the second row.`

In case of ID-based fields the IDs are present in the downstrem message.

The collection names have been also included in the downstream message:

1	`<collection>collection_name1</collection>.`

Recommendation: A collection should be identically configured for each source. Collection name should match in all sources this collection appears.

More info about downstream configuration is available in the Developer guide.

Identifiers¶


Parent Compound Number (PCN) settings

PCN/CN/LN/AID settings¶

Setting	Description
PCN/CN/LN/AID composition	Separate with commas how the PCN/CN/LN/AID (Alternative ID) should be built.
Prefix	Characters placed at the beginning of the ID.
Separator	Characters that separate the prefix from the generated sequence.
Additional fields	Add data from additional fields to ID.
Increment type	Choose between a string or number based sequence.
Increment start	The starting value of the generated sequence. This can be a number or character as well.
Increment format	Depending on increment type, use a valid Java formatter syntax (e.g. %d, %s)
PCN Allocation limit	The PCN allocation limit setting used to control the maximum number of PCNs that could be reserved through the SOAP API. It is deprecated since version 19.2.0. It is removed from the UI since version 24.3.2.
ID prefix field name	Name of the Alternative ID.

 {warning} Using different letter casing in identifiers is highly discouraged as it can lead to unexpected behavior of the application depending on the operating system, and table collation settings of the database server.

Alternative IDs¶

Since version 24.3.4 Secondary (alternative) identifiers can be configured on the Administration page to be assigned to the registered compounds.


Alternative Identifier (AID) settings

When the "Alternative ID enabled" switcher is set to true, the "Alternative ID prefix" field appears on the Registration page.


Alternative ID prefix field

After the registration the Alternative IDs will be visible in the Registration summary and on the Browse page.


Registration summary with Alternative IDs


Browse page with Alternative IDs

LnbRef and Lot Id settings¶


LnbRef and LotID settings

Setting	Description
Validate LnbRef	Controls if LnbRef should be validated against the regular expressions during the registration
LnbRef regular expressions	List of regular expressions used to validate the submitted LnbRef
Autocomplete empty LnbRefs	Registration is made even if no LnbRef is provided. After registration LnbRef field will be updated with the LN value.
Lot Id required	Controls if the existence of Lot Id should be validated during the registration

General settings¶


General settings

Setting	Description	DefaultValue
Id Generator Class	Class name of the corporate ID generator	com.chemaxon.registry.identifier.DefaultSequenceGenerator

Links¶


The setting of the links to third party applications