Clipboard Formats Configuration

Using this configuration it is possible to control the copy/paste operations available in the applet; the formats available for copy or paste can be manipulated, or the corresponding resources can be pre-loaded.

For example, the copy or paste of specific file formats can be forced to be immediately available after the start of the applet, so instead of loading the underlying architecture on demand, the required resources are loaded during the applet initialization time.

Also, the formats available on the clipboard after a simple copy operation can be configured, as well as the list of formats available in the Copy As dialog.

The configuration is available through a Java properties file which has to be placed to the APPLET_CODEBASE/chemaxon/marvin/datatransfer.properties file or MarvinSketch_installation_directory/chemaxon/marvin/datatransfer.properties file. If this file is available in the applet codebase, the configuration will take effect.

This .properties file contains settings for format keys. The property name format is as follows: formatkey.configuration.setting.id, so for example, if somebody wants to disable the PNG format on the Copy As dialog, then the png.use.dialog key has to be set to false.

Available Format Keys in the Property File, and the Corresponding Formats

Format key	The corresponding format
mrv	Marvin Document Format
skc	IsisDraw Sketch file format
cdx	ChemDraw Sketch file format
mol	MDL MOLfile format
rxn	MDL RXNfile format
smiles	Daylight SMILES format
smarts	Daylight SMARTS format
cxsmiles	Chemaxon extended SMILES format
cxsmarts	Chemaxon extended SMARTS format
name	IUPAC name format
trad_name	Traditional name format
inchi	IUPAC InChI/RInChI format
inchikey	IUPAC InChIKey/RInChIKey format
string	Molecule source, containing the actual file format of the molecule object
emf	Enhanced Metafile picture format (available only on Windows platforms)
jpg	JPG image format
png	PNG image format

Available Configurable Properties for All Formats and Their Meanings

Parameter name	Valid values	Meaning
name	can be any String	This will be displayed in the Copy As dialog to represent the format.
disabled	true/false	If set to false, then the format won't be available at all.
preload.copy	true/false	If set to true, then the classes needed for copying in the specified format will be preloaded at appletinitialization.
preload.paste	true/false	If set to true, then the classes needed for pasting in the specified format will be preloaded at appletinitialization.
preload	true/false	If set to true, then the classes needed for copying or pasting in the specified format will be preloaded at appletinitialization.
use.default	true/false	If set to true, then the molecule will be placed to the clipboard by a simple copy operation in the specifiedformat.
use.dialog	true/false	If set to false, then the specified format won't be available in the Copy As dialog.

By default, none of the formats are pre-loaded, all of them are configured as they worked before.

Other Available Options

The following keys are not related to the formats and should be used as they are.

Property name	Valid values	Meaning
ole.enabled	true/false	To disable the Microsoft OLE object copy, set this to false.
ole.name	can be any String	This will be displayed in the Copy As dialog to represent the Microsoft OLE object format.
separator	a comma-separated list of format keys.	After the enumerated formats a separator will be placed in the copy as dialog.

The Default Configuration File

#define where to place separator in the copy as dialog.
#comma separated list, separators will be placed after the listed formats
separator = string

#OLE related settings. Note: OLE is usable only on Windows platforms.
ole.name = Marvin Object (OLE)
ole.enabled = true

#structure formats
mrv.name = Marvin Document (MRV)
mrv.disabled = false
mrv.preload.copy = false
mrv.preload.paste = false
mrv.use.default = true
mrv.use.dialog = true

skc.name = ISIS (Symyx) file (SKC)
skc.disabled = false
skc.preload = false
skc.use.default = true
skc.use.dialog = true

cdx.name = ChemDraw file (CDX)
cdx.disabled = false
cdx.preload = false
cdx.use.default = true
cdx.use.dialog = true

mol.name = MDL MOLfile
mol.disabled = false
mol.preload.copy = false
mol.preload.paste = false
mol.use.default = true
mol.use.dialog = true

rxn.name = MDL RXNfile
rxn.disabled = false
rxn.preload.copy = false
rxn.preload.paste = false
rxn.use.default = true
rxn.use.dialog = true

smiles.name = Daylight SMILES
smiles.disabled = false
smiles.preload.copy = false
smiles.preload.paste = false
smiles.use.default = false
smiles.use.dialog = true

smarts.name = Daylight SMARTS
smarts.disabled = false
smarts.preload.copy = false
smarts.preload.paste = false
smarts.use.default = false
smarts.use.dialog = true

cxsmiles.name = Chemaxon SMILES (CXSMILES)
cxsmiles.disabled = false
cxsmiles.preload.copy = false
cxsmiles.preload.paste = false
cxsmiles.use.default = false
cxsmiles.use.dialog = true

cxsmarts.name = Chemaxon SMARTS (CXSMILES)
cxsmarts.disabled = false
cxsmarts.preload.copy = false
cxsmarts.preload.paste = false
cxsmarts.use.default = false
cxsmarts.use.dialog = true

name.name = Name
name.disabled = false
name.preload.copy = false
name.preload.paste = false
name.use.default = false
name.use.dialog = true

inchi.name = InChI
inchi.disabled = false
inchi.preload = false
inchi.use.default = false
inchi.use.dialog = true

inchikey.name = InChIKey
inchikey.disabled = false
inchikey.preload = false
inchikey.use.default = false
inchikey.use.dialog = true

string.name = Molecule Source (Plain Text)
string.disabled = false
string.preload = false
string.use.default = true
string.use.dialog = true

#image formats
#emf supported only on Windows platforms
emf.name = EMF Image
emf.disabled = false
emf.preload = false
emf.use.default = true
emf.use.dialog = true

#default copy contains these formats because Java Image Flavor is used in default copy.
jpg.name = JPG Image
jpg.disabled = false
jpg.preload = false
jpg.use.default = false
jpg.use.dialog = true

png.name = PNG Image
png.disabled = false
png.preload = false
png.use.default = false
png.use.dialog = true

Further Format Couplings

Please consider this information also while changing the configuration.

• If OLE is enabled, then the OLE data will contain the MRV, the MOL or RXN file, and the EMF image also.
• The default copy places image data to the clipboard, in java image format. If you want to disable this behavior you have to set the jimage.use.default property to false.