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To run these examples:

  1. The Java Virtual Machine version 1.6 or higher and JChem have to be installed on your system.
  2. The PATH environment variable has to be set as described in the Preparing and Running JChem's Batch Files and Shell Scripts manual.
  3. A command shell (under UNIX / Linux: your favorite shell, under Windows: a Cygwin shell or a Command Prompt) has to be run in the RGroupDecomposition_files subdirectory.
    In UNIX / Linux:
    cd jchem/doc/user/RGroupDecomposition_files
    
    In Windows:
    cd jchem\doc\user\RGroupDecomposition_files
    

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