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  • Checker searches for overlapping atoms, i.e., atoms closer than the pre-set percentage of the default atom radius.
  • Fixer offers cleaning the structures by 2D clean (clean).
  • Optimized to show only the terminal carbon and hydrogen atoms so the overlap of the inter-chain atoms is not taken into consideration

Example:

Overlapping Atoms Checker (overlappingAtoms)Warning:Fix
Clean (clean)
Detect Overlapping Atomsex_overlappingatoms_chImage Modifiedex_overlappingatoms_fImage Modified