MacroMolecule.DrawType |
Draw type of all macromolecules on the scene |
"Wire", "Stick", "Ball", "BallAndStick", "StickAndBall", "BallAndWire", "WireAndBall", "Spacefill" |
Wire |
MacroMolecule.ColorType |
Color type of all macromolecules on the scene |
"Constant", "CPK", "Residue", "Chain", "Rainbow", "B-factor", "Secondary Structure" |
CPK |
MacroMolecule.Quality |
Quality of all macromolecules on the scene |
"High", "Medium", "Low" |
Medium |
MacroMolecule.Hydrogens |
Hydrogens of macromolecules are displayed or not. Note that hydrogens are not calculated for macromolecules. |
true, false |
false |
MacroMolecule.LonePairs |
Lone pairs of macromolecules are displayed or not. |
true, false |
false |
MacroMolecule.BallRadius |
Radius of displayed balls in angstroms |
Double |
0.4 |
MacroMolecule.BondRadius |
Radius of bond cylinders in ball&stick mode in angstroms |
Double |
0.1 |
MacroMolecule.StickRadius |
Radius of bond cylinders in stick mode in angstroms |
Double |
0.15 |
MacroMolecule.LineWidth |
Width of displayed lines in wire mode in pixels |
Double |
2 |
MacroMolecule.BondDistance |
Gap between two lines/sticks representing a double bond. It is determined as a percentage of Bond radius. |
Integer |
100 |
MacroMolecule.BondWidth |
Thickness of line/stick representing a double bond. It is expressed relative to the thickness of a single bond. |
Integer |
50 |
MacroMolecule.SmoothStickStyle |
Smooth, shaded display of two colored bonds |
true, false |
false |
MacroMolecule.ScaledBalls |
Are balls scaled according to vdW radius or have uniform size in ball mode or not |
true, false |
false |
MacroMolecule.DisplayBondOrder |
Double, aromatic bonds are displayed differently from single bonds or not |
true, false |
true |
MacroMolecule.Color |
The color used in constant color mode |
java.awt.Color |
#bebebe |