The bond pop-up menu appears when you right-click on a bond within the molecule. It allows you to make changes to the selected bond. It contains options for bond-specific activities that also can be accessed from the Bond Menu.
| Menu item | Description |
|---|---|
| Type | Changes the selected bond type to Single. Changes the type of the selected bond. For more information regarding bonds, see Draw Bonds. |
| Bold | Thickens the selected bond. |
| Hashed | Changes the selected bond hashed. |
| Topology > None | Removes defined bond topologies. |
| Topology > In Ring | The specified bond must be in a ring to score a hit. |
| Topology > In Chain | The specified bond must be in a chain to score a hit. |
| Reacting Center > None | Removes added bond property. |
| Reacting Center > Center | Specifies that the bond takes part in the reaction. |
| Reacting Center > Make or Break | The assigned bond can form or disappear in the reaction. |
| Reacting Center > Change | The assigned bond remains and can alter during the reaction. |
| Reacting Center > Make and Change | The assigned bond can form, break, or change its type during the reaction. |
| Reacting Center > Not Center | The assigned bond can not be the reaction center. |
| Stereo Search | Uses stereo configuration of the specified double bond when the molecule is used as a query. |
| Arrange > Bring to Front | Brings the selected bond in front of the others. |
| Arrange > Send to Back | Sends the selected bond to the back of the others. |
| Align > Horizontally | Orients the selected bond horizontally. |
| Align > Vertically | Orients the bond vertically. |
| Group | Creates a custom Substructure Group (S-group) |
| Add > Explicit Hydrogens | Adds explicit H atoms. |
| Add > Map Atoms | Maps atoms. |
| Add > Data | Attaches data |
| Add > Multi-Center | Adds a multi-center attachment point representing a group of atoms. |
| Add> Position Variation Bond | Create a variable point of attachment to represent a connection point to a group of atoms. |
| Remove > Explicit Hydrogens | Removes explicit H atoms. |
| Remove > Unmap Atoms | Unmaps atoms. |
| Transformation > Drag selection | Enables you to drag the selected bond. |
| Transformation > Rotate in 3D | Options for rotation |
| Format | Formats color, thickness, and length of the selected bond. |
| Add to My templates | Adds the bond to the Advanced Template Toolbar |
| Edit properties | Adds bond properties. |