This action performs aromatization according to the selected aromatization method.
Set aromatization method by using one of the following options:
general: general (Daylight) type aromatization (aromatize) (default)
basic: basic (ChemAxon) type aromatization (aromatize:b)
loose: loose type aromatization (aromatize:l)
See the aromaticity documentationfor detailed description of the above methods.
Example :
| Action | Input | Output |
|---|---|---|
Aromatize:general (aromatize) |
input(1) of aromatize action |
output of general aromatization(1) |
input(2) of aromatize action |
output of general aromatization(2) |
|
input(3) of aromatize action |
output of general aromatization(3) |
Aromatize:basic (aromatize:b) |
input(1) of aromatize action |
output of basic aromatization(1) |
|---|---|---|
input(2) of aromatize action |
output of basic aromatization(2) |
|
input(3) of aromatize action |
output of basic aromatization(3) |
Aromatize:loose (aromatize:l) |
input(1) of aromatize action |
output of loose aromatization(1) |
|---|---|---|
input(2) of aromatize action |
output of loose aromatization(2) |
|
input(3) of aromatize action |
output of loose aromatization(3) |
Note :
Aromatization does not change existing aromatic bonds, so if you need to rearomatize an incorrectly aromatized molecule, please place action "Dearomatize" before "Aromatize".
Example of action sequence: if an action transforms aromatized functional groups, aromatization should occur before transformation in order to receive the correct substructure search results.
input(1) of aromatize action
output of general aromatization(1)
input(2) of aromatize action
output of general aromatization(2)
input(3) of aromatize action
output of basic aromatization(2)
output of loose aromatization(3)