Total results: 35
... parameters as name-value pairs. Configuration examples. <!-- Pharmacophore ... The plugin sorts the atomic charge values on each ionic form according to ...
Atom sets. A comma-separated list of atom indices (0, ..., n -1). An atom in molecule cell number N will be in set M if its number appears in the atomSet N .
Parameter, Meaning, Default. atomSetColor0atomSetColor1...atomSetColor63, Atom set color as a hexadecimal value. N/A. bondSetColor1.
color of bonds. Maximum 64 atom sets can be defined in a molecule. Indexing of atom sets starts from zero. The atom set having the zero index is ...
Use the atomSet applet parameter instead of set, atomSetColor instead of setColor and the MView. ... Atom set colors can be changed using the setColor applet ...
These settings can be found in the View menu and in the Preferences dialog. ... Atom Set - based on previously defined atom set coloring (can be set in ...
Possible values: -1: not center, 1: center, 4: make or break, 8: change, 12: make and change. mrvReactionCenter. mrvSetSeq, Atom set sequence number. order ...
atomic functions: functions referring to an input atom, such as the atom ... atom) values are put to the end of the array after sorting. Checking whether ...
setProperty(String key, String value) and atomic properties are written to extra labels by MolAtom. ... argument contains the plugin parameters as long parameter ...
Use atom/bond set colors. Colors can be specified as a colon separated list of values. Use ak:#rrggbb for atom set k, bk: ...