-
- Chemaxon Assay
- ChemCurator
- Chemicalize
- ChemLocator
- cHemTS
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- Compound Registration
- Administration Guide
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- Appendix A. Calculations
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- Instant JChem
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- Open existing view in the same dataTree
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- Form Scripts
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- Java Plugins
- IJC Plugin Quick Start
- IJC Hello World Plugin
- IJC Plugin tutorial - MyAddField plugin
- IJC Plugin tutorial - MyMathCalc plugin
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- Java Plugins and Java Web Start
- Instant JChem FAQ
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- Markush Editor
- Marvin Desktop Suite
- MarvinSketch
- User Guide
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- Appendix
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- Plexus Connect
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-
- AutoMapper
- Calculator Plugins
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- Generate3D
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- NMR model prediction
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- Tautomerization and tautomers
- Validation results
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- Theory of aqueous solubility prediction
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- Calculators performance reports
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- Chemaxon .NET API
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- User Guide
- Developer Guide
- Glossary
- Document to Structure
- JChem Base
- Administration Guide
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- Query Guide
- Search types
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- Polymer specific search options
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- Standardization
- Hit display-coloring
- Appendix
- Matching Query - Target Examples
- jcsearch Command Line Tool
- jcunique Command Line Tool
- Homology Groups in Markush Structures
- Maximum Common Substructure (MCS) search
- Query Guide
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- Introduction
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- JChem Oracle Cartridge
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- JKlustor
- Markush Tools
- Marvin JS
- User Guide
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- Editor Overview
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- User Guide
- Marvin
- Molconvert
- Name to Structure
- Reactor
- Reactor User's Guide
- Introduction to Reactor
- Reactor Getting Started
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- Reaction Mapping
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- Running Reactor
- Reactor Interfaces
- Reactor Application
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- Reactor in Instant JChem
- Reactor in JChem for Excel
- Reactor in KNIME
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- API, Web Services
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- Screen
- Standardizer
- Standardizer User's Guide
- Standardizer Introduction
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- Standardizer Concepts
- Working with Standardizer
- Standardizer Actions
- Add Explicit Hydrogens
- Alias to Atom
- Alias to Group
- Aromatize
- Clean 2D
- Clean 3D
- Clear Isotopes
- Clear Stereo
- Contract S-groups
- Convert Double Bonds
- Convert Pi-metal Bonds
- Convert to Enhanced Stereo
- Create Group
- Dearomatize
- Disconnect Metal Atoms
- Expand S-groups
- Expand Stoichiometry
- Map
- Map Reaction
- Mesomerize
- Neutralize
- Rearrange Reaction
- Remove Absolute Stereo
- Remove Atom Values
- Remove Attached Data
- Remove Explicit Hydrogens
- Remove Fragment
- Remove R-group Definitions
- Remove Stereo-Care Box
- Replace Atoms
- Set Absolute Stereo
- Set Hydrogen Isotope Symbol
- Strip Salts
- Tautomerize
- Transform
- Ungroup S-groups
- Unmap
- Wedge Clean
- Remove
- Standardizer Transform
- Custom Standardizer Actions
- Remove Solvents
- Creating a Configuration Standardizer
- Interfaces Standardizer
- Standardizer File Formats
- Standardizer Actions
- Standardizer Developer's Guide
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- Standardizer Licensing
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- Structure Checker
- Structure Checker User's Guide
- Introduction
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- Abbreviated Group
- Absent Chiral Flag
- Absolute Stereo Configuration
- Alias
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- Atom Value
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- Attached Data
- Bond Angle
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- Crossed Double Bond
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- Isotope
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- Multicenter
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- Multiple Stereocenter
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- Query Atom
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- Solvent
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- Straight Double Bond
- Substructure
- Three Dimension 3D
- Unbalanced Reaction
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- Wiggly Bond
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- Creating a Configuration
- Custom Checkers and Fixers
- Interfaces of Structure Checker
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- Structure to Name
-
- JChem for Office
- Administration Guide
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- JChem for Excel User's Guide
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- Working with Structures in Excel
- Add a Structure to a Cell
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- Resize Structures
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- Calculations with Third-Party Services
- Specify External Image and Name Services
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- Manage Connections
- Add an Oracle Connection in JChem for Excel
- Add a MySQL Connection in JChem for Excel
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- Dissimilarity
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- Image
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- Checking DirectX Information
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- Add a PostgreSQL Connection in JChem for Office
- Add a JChem Web Services Connection in JChem for Office
- Favorite Entities in JChem for Office
- Edit and Delete Connections in JChem for Office
- Import from Database in JChem for Office
- Import from IJC Database
- Manage Connections in JChem for Office
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- Structures are not displayed in Excel cell
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-
- Chemaxon Configuration Folder
- Chemical Fingerprints
- Chemical Terms
- File Formats
- Basic export options
- Compression and Encoding
- Document formats
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- Molecule file conversion with Molconvert
- Molecule Formats
- CML
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- Name
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- FASTA file format
- Protein Data Bank (PDB) file format
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- XYZ format
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- Markush DARC format - VMN
- CSV
- Input and Output System
- License Management
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- Public Repository
- Scientific Background
- Structure Representation
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- Aromaticity
- Implicit, Explicit and Query Hydrogens
- Assigning stereochemistry descriptors
- Cleaning options
- Deprecated and Removed Methods
- Relative configuration of tetrahedral stereo centers
- Iterator Factory
- Atom and bond-set handling
- Graphic object handling
- Supported Java Versions
- Used Libraries
-
- BioEddie
- Biomolecule Toolkit
- Document to Database
- Fragmenter
- JChem Neo4j Cartridge
- JChem Web Services Classic
- Markush Overlap
- MarvinSpace
- MarvinSpace User's Guide
- MarvinSpace Developer's Guide
- MarvinSpace History of Changes
- Metabolizer
- Pipeline Pilot Components
- Trainer Engine
Mesomerize
This action takes the canonical resonant form of the molecule.
Example :
| Action | Input | Output |
|---|---|---|
Mesomerize (mesomerize) |
 mesomerize input |
 mesomerize output |
Note : The canonical resonant structure of a molecule is always returned in dearomatized form.