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This color scheme is based on RasMol's shapely color scheme for nucleic and amino acids. There are two main differences:

  1. colors are web-optimized
  2. some colors are darker in case of light background
0UNKmedium purple#ff00ff#990099
1-2A, +Alight blue#9999ff#333399
3-4C, +Clight orange#ff9933#996600
5-6G, +Gmedium salmon#ff6666#993333
7-8T, +Tlight green#33ff33#33ff33
9-10I, +Imedium purple#ff00ff#990099
11-12U, +Umedium purple#ff00ff#990099
13ALAmedium green#99ff99#66cc66
14ARGblue#0000ff#0000ff
15ASNlight salmon#ff6666#993333
16ASPdark rose#990033#990033
17CYSmedium yellow#ffff66#666633
18GLNdark salmon#ff3333#cc3333
19GLUdark brown#660000#660000
20GLYwhite#ffffff#000000
21HISmedium blue#6666ff#6666cc
22ILEdark green#006600#006600
23LEUolive green#336633#336633
24LYSroyal blue#3333cc#3333cc
25METlight brown#cc9933#cc9933
26PHEolive gray#666633#666633
27PROdark gray#666666#666666
28SERmedium orange#ff6633#ff6633
29THRdark orange#cc3300#cc3300
30TRPolive brown#666600#666600
31TYRmedium brown#996633#996633
32VALlight purple#ff99ff#ff99ff
33-34ASX, GLXmedium purple#ff00ff#990099