Overlapping Atoms

  • Checker searches for overlapping atoms, i.e., atoms closer than the pre-set percentage of the default atom radius.

  • Fixer offers cleaning the structures by 2D clean (clean).

  • Optimized to show only the terminal carbon and hydrogen atoms so the overlap of the inter-chain atoms is not taken into consideration

Example:

Overlapping Atoms Checker (overlappingAtoms)

Warning:

Fix

Clean (clean)

Detect Overlapping Atoms

images/download/attachments/1806472/ex_overlappingatoms_ch.png
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images/download/attachments/1806472/ex_overlappingatoms_f.png
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