Aromatize

This action performs aromatization according to the selected aromatization method.

Set aromatization method by using one of the following options:

  • general: general (Daylight) type aromatization (aromatize) (default)

  • basic: basic (ChemAxon) type aromatization (aromatize:b)

  • loose: loose type aromatization (aromatize:l)

See the aromaticity documentation for detailed description of the above methods.

Example :

Action

Input

Output

Aromatize:general
(aromatize)

images/download/attachments/1803670/aromatize1_in.png
input(1) of aromatize action

images/download/attachments/1803670/aromatize1_general_out.png
output of general aromatization(1)

images/download/attachments/1803670/aromatize2_in.png
input(2) of aromatize action

images/download/attachments/1803670/aromatize2_general_out.png
output of general aromatization(2)

images/download/attachments/1803670/aromatize3_in.png
input(3) of aromatize action

images/download/attachments/1803670/aromatize3_in.png
output of general aromatization(3)

Aromatize:basic
(aromatize:b)

images/download/attachments/1803670/aromatize1_in.png
input(1) of aromatize action

images/download/attachments/1803670/aromatize1_general_out.png
output of basic aromatization(1)

images/download/attachments/1803670/aromatize2_in.png
input(2) of aromatize action

images/download/attachments/1803670/aromatize2_basic_out.png
output of basic aromatization(2)

images/download/attachments/1803670/aromatize3_in.png
input(3) of aromatize action

images/download/attachments/1803670/aromatize3_in.png
output of basic aromatization(3)

Aromatize:loose
(aromatize:l)

images/download/attachments/1803670/aromatize1_in.png
input(1) of aromatize action

images/download/attachments/1803670/aromatize1_general_out.png
output of loose aromatization(1)

images/download/attachments/1803670/aromatize2_in.png
input(2) of aromatize action

images/download/attachments/1803670/aromatize2_basic_out.png
output of loose aromatization(2)

images/download/attachments/1803670/aromatize3_in.png
input(3) of aromatize action

images/download/attachments/1803670/aromatize3_loose_out.png
output of loose aromatization(3)

Note :

  • Aromatization does not change existing aromatic bonds, so if you need to rearomatize an incorrectly aromatized molecule, please place action "Dearomatize" before "Aromatize".

  • Example of action sequence: if an action transforms aromatized functional groups, aromatization should occur before transformation in order to receive the correct substructure search results.